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Open Targets Platform 25.03 TABULAR

Open Targets · CC0-1.0
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Structured target–disease–drug association knowledge as Parquet tables. Useful for grounding biomedical models, building knowledge graphs, and linking drug mechanisms to diseases. Open (CC0) and non-patient data.

Potential training uses
  • Target/disease/drug link prediction
  • Biomedical entity & relation grounding
  • Retrieval over drug mechanism-of-action evidence
Description
Biomedical target-disease-drug association data as Parquet table folders (targets, diseases, drugs, known drugs, ChEMBL evidence).
Source
https://platform.opentargets.org/downloads
Tags
biomedicaldrugdiseasetargetparquet

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Snapshot & provenance

Snapshot kind
TRUSTED_LOCAL read-only reference (not copied)
State
PUBLISHED
Files
1254
Package SHA-256
— (trusted local seed)
Published
2026-07-11T08:58:35.601692+00:00

Quality overview

0 error · 0 warning · 0 info

Assets (8)

PARQUET_TABLE · 8

NameSource pathFilesRowsQuality
disease disease 1 28513 OK
drug_mechanism_of_action drug_mechanism_of_action 200 6332 OK
drug_molecule drug_molecule 200 18081 OK
evidence__sourceId=chembl evidence__sourceId=chembl 200 573124 OK
known_drug known_drug 53 253459 OK
target target 200 78766 OK
association_by_datasource_direct association_by_datasource_direct 200 3826181 OK
association_overall_direct association_overall_direct 200 3628026 OK

Annotations

HUMAN_CURATED summary · APPROVED
Open Targets Platform biomedical knowledge tables linking targets, diseases, drugs and supporting evidence. Not patient-level data.
HUMAN_CURATED customer_summary · APPROVED
Structured target–disease–drug association knowledge as Parquet tables. Useful for grounding biomedical models, building knowledge graphs, and linking drug mechanisms to diseases. Open (CC0) and non-patient data.
HUMAN_CURATED training_uses · APPROVED
Target/disease/drug link prediction Biomedical entity & relation grounding Retrieval over drug mechanism-of-action evidence