target · Protege

target PARQUET_TABLE OK

Source path: target
Format: parquet
Files: 200
Rows: 78766
Compression: SNAPPY
Row groups: 200
Detected by: parquet_part_folder
Processor: 1.0.0

Schema (29 fields)

#	Field	Type	Nullable
0	id	string	yes
1	approvedSymbol	string	yes
2	biotype	string	yes
3	transcriptIds	list<element: string>	yes
4	canonicalTranscript	struct<id: string, chromosome: string, start: int64, end: int64, strand: string>	yes
5	canonicalExons	list<element: string>	yes
6	genomicLocation	struct<chromosome: string, start: int64, end: int64, strand: int32>	no
7	alternativeGenes	list<element: string>	yes
8	approvedName	string	no
9	go	list<element: struct<id: string, source: string, evidence: string, aspect: string, geneProduct: string, ecoId: string>>	yes
10	hallmarks	struct<attributes: list<element: struct<pmid: int64, description: string, attribute_name: string> not null>, cancerHallmarks: list<element: struct<pmid: int64, description: string, impact: string, label: string> not null>>	yes
11	synonyms	list<element: struct<label: string, source: string>>	no
12	symbolSynonyms	list<element: struct<label: string, source: string>>	no
13	nameSynonyms	list<element: struct<label: string, source: string>>	no
14	functionDescriptions	list<element: string>	yes
15	subcellularLocations	list<element: struct<location: string, source: string, termSL: string, labelSL: string>>	yes
16	targetClass	list<element: struct<id: int64, label: string, level: string not null> not null>	yes
17	obsoleteSymbols	list<element: struct<label: string, source: string>>	no
18	obsoleteNames	list<element: struct<label: string, source: string>>	no
19	constraint	list<element: struct<constraintType: string not null, score: float, exp: float, obs: int32, oe: float, oeLower: float, oeUpper: float, upperRank: int32, upperBin: int32, upperBin6: int32> not null>	yes
20	tep	struct<targetFromSourceId: string, description: string, therapeuticArea: string, url: string>	yes
21	proteinIds	list<element: struct<id: string, source: string> not null>	yes
22	dbXrefs	list<element: struct<id: string, source: string>>	no
23	chemicalProbes	list<element: struct<control: string, drugId: string, id: string, isHighQuality: bool, mechanismOfAction: list<element: string>, origin: list<element: string>, probeMinerScore: int64, probesDrugsScore: int64, scoreInCells: int64, scoreInOrganisms: int64, targetFromSourceId: string, urls: list<element: struct<niceName: string, url: string>>> not null>	yes
24	homologues	list<element: struct<speciesId: string, speciesName: string, homologyType: string, targetGeneId: string, isHighConfidence: string, targetGeneSymbol: string, queryPercentageIdentity: double, targetPercentageIdentity: double, priority: int32> not null>	yes
25	tractability	list<element: struct<modality: string not null, id: string not null, value: bool not null> not null>	yes
26	safetyLiabilities	list<element: struct<event: string, eventId: string, effects: list<element: struct<direction: string, dosing: string>>, biosamples: list<element: struct<cellFormat: string, cellLabel: string, tissueId: string, tissueLabel: string>>, datasource: string, literature: string, url: string, studies: list<element: struct<description: string, name: string, type: string>>> not null>	yes
27	pathways	list<element: struct<pathwayId: string, pathway: string, topLevelTerm: string> not null>	yes
28	tss	int64	yes

Field

Type

Nullable

Partition

string

yes

approvedSymbol

string

yes

biotype

string

yes

transcriptIds

list<element: string>

yes

canonicalTranscript

struct<id: string, chromosome: string, start: int64, end: int64, strand: string>

yes

canonicalExons

list<element: string>

yes

genomicLocation

struct<chromosome: string, start: int64, end: int64, strand: int32>

alternativeGenes

list<element: string>

yes

approvedName

string

list<element: struct<id: string, source: string, evidence: string, aspect: string, geneProduct: string, ecoId: string>>

yes

hallmarks

struct<attributes: list<element: struct<pmid: int64, description: string, attribute_name: string> not null>, cancerHallmarks: list<element: struct<pmid: int64, description: string, impact: string, label: string> not null>>

yes

synonyms

list<element: struct<label: string, source: string>>

symbolSynonyms

list<element: struct<label: string, source: string>>

nameSynonyms

list<element: struct<label: string, source: string>>

functionDescriptions

list<element: string>

yes

subcellularLocations

list<element: struct<location: string, source: string, termSL: string, labelSL: string>>

yes

targetClass

list<element: struct<id: int64, label: string, level: string not null> not null>

yes

obsoleteSymbols

list<element: struct<label: string, source: string>>

obsoleteNames

list<element: struct<label: string, source: string>>

constraint

list<element: struct<constraintType: string not null, score: float, exp: float, obs: int32, oe: float, oeLower: float, oeUpper: float, upperRank: int32, upperBin: int32, upperBin6: int32> not null>

yes

tep

struct<targetFromSourceId: string, description: string, therapeuticArea: string, url: string>

yes

proteinIds

list<element: struct<id: string, source: string> not null>

yes

dbXrefs

list<element: struct<id: string, source: string>>

chemicalProbes

list<element: struct<control: string, drugId: string, id: string, isHighQuality: bool, mechanismOfAction: list<element: string>, origin: list<element: string>, probeMinerScore: int64, probesDrugsScore: int64, scoreInCells: int64, scoreInOrganisms: int64, targetFromSourceId: string, urls: list<element: struct<niceName: string, url: string>>> not null>

yes

homologues

list<element: struct<speciesId: string, speciesName: string, homologyType: string, targetGeneId: string, isHighConfidence: string, targetGeneSymbol: string, queryPercentageIdentity: double, targetPercentageIdentity: double, priority: int32> not null>

yes

tractability

list<element: struct<modality: string not null, id: string not null, value: bool not null> not null>

yes

safetyLiabilities

list<element: struct<event: string, eventId: string, effects: list<element: struct<direction: string, dosing: string>>, biosamples: list<element: struct<cellFormat: string, cellLabel: string, tissueId: string, tissueLabel: string>>, datasource: string, literature: string, url: string, studies: list<element: struct<description: string, name: string, type: string>>> not null>

yes

pathways

list<element: struct<pathwayId: string, pathway: string, topLevelTerm: string> not null>

yes

tss

int64

yes

Candidate relationships

Evidence-backed candidates, not authoritative foreign keys.

Kind	Related asset	Confidence	Evidence
shared_fields	disease	0.40	{'shared_keys': ['dbxrefs', 'id', 'synonyms']}
shared_fields	drug_molecule	0.40	{'shared_keys': ['id', 'synonyms']}
shared_fields	evidence__sourceId=chembl	0.40	{'shared_keys': ['id', 'pathways']}
shared_fields	known_drug	0.40	{'shared_keys': ['approvedname', 'approvedsymbol', 'synonyms', 'targetclass']}

Kind

Related asset

Confidence

Evidence

shared_fields

disease

0.40

{'shared_keys': ['dbxrefs', 'id', 'synonyms']}

shared_fields

drug_molecule

0.40

{'shared_keys': ['id', 'synonyms']}

shared_fields

evidence__sourceId=chembl

0.40

{'shared_keys': ['id', 'pathways']}

shared_fields

known_drug

0.40

{'shared_keys': ['approvedname', 'approvedsymbol', 'synonyms', 'targetclass']}

Bounded preview

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Annotations

PIPELINE_EXTRACTED enrichment_candidate APPROVED

Selected for summary, tags enrichment.